Watch src-oepkgs/speedseq

Samblaster is a flexible framework for rapid genome analysis and interpretation.

Watch src-oepkgs/graphtyper

genewise: a program for aligning proteins or protein HMMs to DNA, and dynamite a rather cranky "macro language" which automates the production of dynamic programming.

Watch src-oepkgs/cactus

Cactus is a reference-free whole-genome alignment program, as well as a pagenome graph construction toolkit.

Watch src-oepkgs/elk-code

ELK code is an all electron full potential linearized enhanced plane wave code, which plays an important role in the field of density functional theory.

Watch src-oepkgs/psmc

The full name of PSMC is pairwise sequentially Markovian covalent.

Watch src-oepkgs/meraculous

meraculous is a genome-wide assembler for next-generation sequencing data for large genomes

Watch src-oepkgs/repeatscout

repeatscout is to identify repeats of sequences from the genome, in cases where manual management of the duplication database is not available

Watch src-oepkgs/quantumpackage

Quantum Package is an open-source programming environment for quantum chemistry.

Watch src-oepkgs/genomestrip

Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are designed to detect shared variation using data from multiple individuals.

Watch Amon/oepkgs-management forked from oepkgs/oepkgs-management