# affyQC_Module

**Repository Path**: arrayanalysis/affyQC_Module

## Basic Information

- **Project Name**: affyQC_Module
- **Description**: No description available
- **Primary Language**: Unknown
- **License**: Not specified
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2020-03-10
- **Last Updated**: 2020-12-19

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

affyQC_Module
=============

Affymetrix microarrays of different technology versions are very often used in transcriptomics analysis.  Quality control and normalization approaches do exist, especially as packages in Bioconductor/R. However: -	Procedures are often different between teams. -	They are not always easy to access as they run through command lines. -	It is often not clear what the meaning of the specific settings and results are -	They are not always usable for the newer technology types of arrays. To tackle this, we proposed an automated well-documented and user-friendly pipeline for Affymetrix microarray quality control and normalization.