From 822d4a7ae91e4052f6673a751098c331a93107a1 Mon Sep 17 00:00:00 2001
From: AntsCode <AntsCodeCommunity@163.com>
Date: Wed, 15 Jun 2022 11:53:45 +0800
Subject: [PATCH 1/2] Modify comments --> kallisto 0.48.0

---
 .../kallisto/0.48.0/h0d531b0_1/test/generate_expected_data.sh   | 2 +-
 .../kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh  | 2 +-
 Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/run_test.sh   | 2 +-
 3 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_expected_data.sh b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_expected_data.sh
index bc218e65..217e829f 100644
--- a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_expected_data.sh
+++ b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_expected_data.sh
@@ -46,5 +46,5 @@ function main() {
   fi
 }
 
-# /bin/bash ~/hpc/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_expected_data.sh /opt/anaconda3
+# /bin/bash ~/hpc/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_expected_data.sh /root/anaconda3
 main "$@"
diff --git a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh
index 18727832..28bf8a63 100644
--- a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh
+++ b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh
@@ -24,5 +24,5 @@ function main() {
   fi
 }
 
-# /bin/bash ~/hpc/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh /opt/anaconda3
+# /bin/bash ~/hpc/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh /root/anaconda3
 main "$@"
diff --git a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/run_test.sh b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/run_test.sh
index 9a37c3b7..a4f17f4a 100755
--- a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/run_test.sh
+++ b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/run_test.sh
@@ -64,5 +64,5 @@ function main() {
   test_clean "${TEST_CASE_DIR}" "${EXPECTED_DIR}" "${PRACTICAL_DIR}" || return 1
 }
 
-# /bin/bash ~/hpc/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh /opt/anaconda3
+# /bin/bash ~/hpc/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/test/generate_practical_data.sh /root/anaconda3
 main "$@"
-- 
Gitee


From 050f6069f00f0875823e8477bfdc6b18688b1609 Mon Sep 17 00:00:00 2001
From: AntsCode <AntsCodeCommunity@163.com>
Date: Wed, 15 Jun 2022 11:55:48 +0800
Subject: [PATCH 2/2] Fix the problem that the conda command cannot be used
 because the build script does not initialize the conda environment -->
 kallisto 0.48.0

---
 .../0.48.0/h0d531b0_1/cloudbuild/build.sh     | 38 ++++++++++++++++++-
 1 file changed, 37 insertions(+), 1 deletion(-)

diff --git a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/cloudbuild/build.sh b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/cloudbuild/build.sh
index d58e060f..36ff64b0 100644
--- a/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/cloudbuild/build.sh
+++ b/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/cloudbuild/build.sh
@@ -1,2 +1,38 @@
 #!/bin/bash
-conda build $(dirname $(dirname "$0"))/recipe
+
+function is_expected_architecture() {
+  if [ $(uname -m) != "$1" ]; then
+    echo -e "\033[1;31;1mThe current script only supports execution on $1 architecture.\033[0m"
+    return 1
+  fi
+}
+
+function set_script_dir() {
+  local REL_SCRIPT_DIR
+  REL_SCRIPT_DIR="$(dirname "${BASH_SOURCE[0]}")" || return 1
+  SCRIPT_DIR="$(cd "${REL_SCRIPT_DIR}" && pwd)" || return 1
+}
+
+function conda_initialize() {
+  __conda_setup="$("$1/bin/conda" 'shell.bash' 'hook' 2>/dev/null)"
+  if [ $? -eq 0 ]; then
+    eval "$__conda_setup"
+  else
+    if [ -f "$1/etc/profile.d/conda.sh" ]; then
+      . "$1/etc/profile.d/conda.sh"
+    else
+      export PATH="$1/bin:$PATH"
+    fi
+  fi
+  unset __conda_setup
+}
+
+function main() {
+  is_expected_architecture aarch64 || return 1
+  set_script_dir || return 1
+  conda_initialize "$1"
+  conda build "$(dirname "$SCRIPT_DIR")/recipe"
+}
+
+# /bin/bash ~/hpc/Anaconda/bioconda/kallisto/0.48.0/h0d531b0_1/cloudbuild/build.sh /root/anaconda3
+main "$@"
-- 
Gitee