diff --git a/package/bwa/0.7.17/install.sh b/package/bwa/0.7.17/clang/install.sh
similarity index 78%
rename from package/bwa/0.7.17/install.sh
rename to package/bwa/0.7.17/clang/install.sh
index f71c6a0bb41f47289b550ce86659f7a3d6ce8030..6b5e85a17ce1f76a683a66784536761ec85fe0b3 100644
--- a/package/bwa/0.7.17/install.sh
+++ b/package/bwa/0.7.17/clang/install.sh
@@ -3,6 +3,8 @@
 #!/bin/bash
 set -x
 set -e
+. ${DOWNLOAD_TOOL} -u https://github.com/jratcliff63367/sse2neon/archive/refs/heads/master.zip -f sse2neon-master.zip
+. ${DOWNLOAD_TOOL} -u https://sourceforge.net/projects/bio-bwa/files/bwa-0.7.17.tar.bz2
 cd ${JARVIS_TMP}
 rm -rf bwa-0.7.17  sse2neon-master
 tar  -xvf ${JARVIS_DOWNLOAD}/bwa-0.7.17.tar.bz2
diff --git a/package/ctffind/4.1.14/clang/install.sh b/package/ctffind/4.1.14/clang/install.sh
new file mode 100644
index 0000000000000000000000000000000000000000..ee713e6f853553199b06d4c9a6cef7bb4221b694
--- /dev/null
+++ b/package/ctffind/4.1.14/clang/install.sh
@@ -0,0 +1,21 @@
+#download from https://grigoriefflab.umassmed.edu/system/tdf?path=ctffind-4.1.14.tar.gz\&file=1\&type=node\&id=26
+#!/bin/bash
+set -x
+set -e
+. ${DOWNLOAD_TOOL} -u https://grigoriefflab.umassmed.edu/system/tdf?path=ctffind-4.1.14.tar.gz\&file=1\&type=node\&id=26 -f ctffind-4.1.14.tar.gz
+cd ${JARVIS_TMP}
+rm -rf ctffind-4.1.14
+tar -xvf ${JARVIS_DOWNLOAD}/ctffind-4.1.14.tar.gz
+cd ctffind-4.1.14
+
+sed -i "7s%^%//%g" src/core/matrix.cpp
+sed -i '7i  #define _AL_SINCOS(x, s, c)   s = sinf(x);  c = cosf(x);' src/core/matrix.cpp
+#yum install -y libjpeg* libtiff* fftw*
+autoreconf -f -i
+./configure --prefix=$1 --disable-mkl --enable-openmp --enable-debugmode CC=clang CXX=clang++ FC=flang
+sed -i "296s/-O2/-O0/g" Makefile
+sed -i "298s/-O2/-O0/g" Makefile
+sed -i "302s/-O2/-O0/g" Makefile
+make 
+make install
+
diff --git a/package/gatk/4.0.0.0/install.sh b/package/gatk/4.0.0.0/install.sh
new file mode 100644
index 0000000000000000000000000000000000000000..4f927170b74625140903a20d2f4b97c9f4f8b715
--- /dev/null
+++ b/package/gatk/4.0.0.0/install.sh
@@ -0,0 +1,11 @@
+#download from https://github.com/broadinstitute/gatk/releases/download/4.0.0.0/gatk-4.0.0.0.zip
+#module  load      
+#!/bin/bash
+set -x
+set -e
+. ${DOWNLOAD_TOOL} -u https://github.com/broadinstitute/gatk/releases/download/4.0.0.0/gatk-4.0.0.0.zip
+
+cd ${JARVIS_TMP}
+
+unzip ${JARVIS_DOWNLOAD}/gatk-4.0.0.0.zip  -d $1
+mv $1/gatk-4.0.0.0 $1/bin
diff --git a/package/grads/2.0.a4/install.sh b/package/grads/2.0.a4/install.sh
index 5d01ebf08760c8a7fbd60b52a7d6435c8a4ecac4..e35174dbb942c8f668af3ba2813db3e8fc168aaf 100644
--- a/package/grads/2.0.a4/install.sh
+++ b/package/grads/2.0.a4/install.sh
@@ -3,11 +3,13 @@
 set -x
 set -e
 
+. ${DOWNLOAD_TOOL} -u https://sourceforge.net/projects/opengrads/files/grads2/2.0.a4-1/grads-2.0.a4.oga.1-src.tar.gz
+
 cd ${JARVIS_TMP}
 rm -rf grads-2.0.a4.oga.1-src.tar.gz
 tar -xvf ${JARVIS_DOWNLOAD}/grads-2.0.a4.oga.1-src.tar.gz
 cd grads-2.0.a4.oga.1
-#CC=clang CXX=clang++ 
+#export CC=clang CXX=clang++ FC=flang
 ./configure --prefix=$1 --build=aarch64-unknown-linux-gnu
 make -j
 make install
diff --git a/package/hdf5/1.10.1/install.sh b/package/hdf5/1.10.1/install.sh
index 738737190130a24bda1c666224e903607e73d362..d7baecbe6a3eb0f722466ae054fdd5ac08fabad6 100644
--- a/package/hdf5/1.10.1/install.sh
+++ b/package/hdf5/1.10.1/install.sh
@@ -2,7 +2,7 @@
 #!/bin/bash
 set -x
 set -e
-
+. ${DOWNLOAD_TOOL} -u https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.1/src/hdf5-1.10.1.tar.gz
 cd ${JARVIS_TMP}
 tar -xvf ${JARVIS_DOWNLOAD}/hdf5-1.10.1.tar.gz
 cd hdf5-1.10.1
diff --git a/package/jasper/1.900.2/install.sh b/package/jasper/1.900.2/install.sh
index b61c9f4ee90566784d2b71b13713204ae1b9b3b2..ade3fa523323afa97c01703ec5ac91788c4d336c 100644
--- a/package/jasper/1.900.2/install.sh
+++ b/package/jasper/1.900.2/install.sh
@@ -2,12 +2,12 @@
 #!/bin/bash
 set -x
 set -e
-
+. ${DOWNLOAD_TOOL} -u https://www.ece.uvic.ca/~frodo/jasper/software/jasper-1.900.2.tar.gz
 cd ${JARVIS_TMP}
 rm -rf jasper-1.900.2
 tar -xvf ${JARVIS_DOWNLOAD}/jasper-1.900.2.tar.gz
 cd jasper-1.900.2
-#CC=clang CXX=clang++ 
+#export CC=clang CXX=clang++ 
 ./configure --prefix=$1
 make -j
 make install
diff --git a/package/opencv/4.5.5/install.sh b/package/opencv/4.5.5/install.sh
new file mode 100644
index 0000000000000000000000000000000000000000..2077723beb8c8120a84da81085f150fcea5afd14
--- /dev/null
+++ b/package/opencv/4.5.5/install.sh
@@ -0,0 +1,15 @@
+#download from https://github.com/opencv/opencv/archive/refs/tags/4.5.5.tar.gz
+#!/bin/bash
+set -x
+set -e
+
+. ${DOWNLOAD_TOOL} -u https://github.com/opencv/opencv/archive/refs/tags/4.5.5.tar.gz -f opencv-4.5.5.tar.gz
+cd ${JARVIS_TMP}
+rm -rf opencv-4.5.5
+tar -xvf ${JARVIS_DOWNLOAD}/opencv-4.5.5.tar.gz
+cd opencv-4.5.5
+mkdir build && cd build
+#export CC=clang CXX=clang++ FC=flang 
+cmake .. -DCMAKE_INSTALL_PREFIX=$1
+make -j
+make install
diff --git a/package/relion/3.1.2/install.sh b/package/relion/3.1.2/install.sh
new file mode 100644
index 0000000000000000000000000000000000000000..cc4da6662f6ebfa5ef40ca3c1ee1a4a64ce343a8
--- /dev/null
+++ b/package/relion/3.1.2/install.sh
@@ -0,0 +1,17 @@
+#download from https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz
+#!/bin/bash
+set -x
+set -e
+
+. ${DOWNLOAD_TOOL} -u  https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz
+cd ${JARVIS_TMP}
+rm -rf relion-3.1.2 
+tar -xvf ${JARVIS_DOWNLOAD}/relion-3.1.2.tar.gz
+cd relion-3.1.2
+mkdir build && cd build
+#yum install -y libtiff-* fltk* fltk-devel*
+#yum -y install xorg-x11-xauth
+#export CC=clang CXX=clang++ FC=flang
+cmake -DCUDA=OFF  -DBUILD_SHARED_LIBS=OFF -DCMAKE_BUILD_TYPE=release  -DCMAKE_INSTALL_PREFIX=$1  ..
+make -j
+make install
diff --git a/package/wxWidgets/3.0.5/install.sh b/package/wxWidgets/3.0.5/install.sh
new file mode 100644
index 0000000000000000000000000000000000000000..65e0510d7a32cf2d12af8aecacc23f3c0997bf15
--- /dev/null
+++ b/package/wxWidgets/3.0.5/install.sh
@@ -0,0 +1,14 @@
+#download from https://github.com/wxWidgets/wxWidgets/archive/refs/tags/v3.0.5.tar.gz
+#!/bin/bash
+set -x
+set -e
+
+. ${DOWNLOAD_TOOL} -u https://github.com/wxWidgets/wxWidgets/archive/refs/tags/v3.0.5.tar.gz -f wxWidgets-3.0.5.tar.gz
+cd ${JARVIS_TMP}
+rm -rf wxWidgets-3.0.5
+tar -xvf ${JARVIS_DOWNLOAD}/wxWidgets-3.0.5.tar.gz
+cd wxWidgets-3.0.5
+#CC=clang CXX=clang++ FC=flang
+./configure --disable-gui  --prefix=$1  
+make -j
+make install
diff --git a/templates/bwa/0.7.17/data.bwa.arm.cpu.config b/templates/bwa/0.7.17/data.bwa.arm.cpu.config
index c667b95b42ee56323e471cc73aa0b167edfd0205..b86b71b1dd40346732cc3391cf5640b0c9cd8914 100644
--- a/templates/bwa/0.7.17/data.bwa.arm.cpu.config
+++ b/templates/bwa/0.7.17/data.bwa.arm.cpu.config
@@ -3,8 +3,6 @@
 
 [DOWNLOAD]
 bwa/0.7.17 https://sourceforge.net/projects/bio-bwa/files/bwa-0.7.17.tar.bz2
-sse2neon/master https://github.com/jratcliff63367/sse2neon/archive/refs/heads/master.zip sse2neon.zip
-bisheng/2.1.0 https://mirrors.huaweicloud.com/kunpeng/archive/compiler/bisheng_compiler/bisheng-compiler-2.1.0-aarch64-linux.tar.gz
 
 [DEPENDENCY]
 module use ./software/modulefiles
@@ -25,7 +23,23 @@ binary_dir =
 case_dir = 
 
 [BUILD]
-./jarvis -install bwa/0.7.17 clang
+#./jarvis -install bwa/0.7.17/clang clang
+cd ${JARVIS_TMP}
+rm -rf bwa-0.7.17  sse2neon-master
+tar  -xvf ${JARVIS_DOWNLOAD}/bwa-0.7.17.tar.bz2
+unzip ${JARVIS_DOWNLOAD}/sse2neon.zip
+cd bwa-0.7.17
+bisheng_includedir=`which clang`
+bisheng_includedir=${bisheng_includedir%/*/*}/include
+cp ${JARVIS_TMP}/sse2neon-master/SSE2NEON.h ${bisheng_includedir}
+sed -i "1s/gcc/clang/g" Makefile
+sed -i "14s%$%-I${bisheng_includedir}%g" Makefile
+sed -i "29s/<emmintrin.h>/<SSE2NEON.h>/g" ksw.c
+sed -i "33s%^%//%g" rle.h
+make
+mkdir -p $JARVIS_ROOT/software/apps/bisheng2/bwa/0.7.17 
+cp -r ../bwa-0.7.17/* $JARVIS_ROOT/software/apps/bisheng2/bwa/0.7.17
+rm -rf ${bisheng_includedir}/SSE2NEON.h
 
 [RUN]
 run = 
diff --git a/templates/ctffind/4.1.14/data.ctffind.arm.cpu.config b/templates/ctffind/4.1.14/data.ctffind.arm.cpu.config
new file mode 100644
index 0000000000000000000000000000000000000000..1eda15c048cf65a92b7feea4faa60e5e78b563f5
--- /dev/null
+++ b/templates/ctffind/4.1.14/data.ctffind.arm.cpu.config
@@ -0,0 +1,36 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+ctffind/4.1.14 https://grigoriefflab.umassmed.edu/system/tdf?path=ctffind-4.1.14.tar.gz\&file=1\&type=node\&id=26 ctffind-4.1.14.tar.gz 
+
+
+[DEPENDENCY]
+module use ./software/modulefiles
+module purge
+./jarvis -install bisheng/2.1.0 com
+module add bisheng2/2.1.0
+export CC=clang CXX=clang++ FC=flang
+./jarvis -install wxWidgets/3.0.5 clang
+
+
+[ENV]
+module purge
+module use ${JARVIS_ROOT}/software/modulefiles
+module add bisheng2/2.1.0
+module add wxWidgets/3.0.5
+export CC=clang CXX=clang++ FC=flang
+
+[APP]
+app_name = ctffind
+build_dir = ${JARVIS_ROOT}
+binary_dir = 
+case_dir = 
+
+[BUILD]
+./jarvis -install ctffind/4.1.14/clang clang
+
+[RUN]
+run = 
+binary = 
+node = 1
diff --git a/templates/gatk/4.0.0.0/data.gatk.arm.cpu.config b/templates/gatk/4.0.0.0/data.gatk.arm.cpu.config
new file mode 100644
index 0000000000000000000000000000000000000000..162e9bf1ecf195b1bbf0777cadd7d8fd308230aa
--- /dev/null
+++ b/templates/gatk/4.0.0.0/data.gatk.arm.cpu.config
@@ -0,0 +1,28 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+gtak/4.0.0 https://github.com/broadinstitute/gatk/releases/download/4.0.0.0/gatk-4.0.0.0.zip
+
+[DEPENDENCY]
+
+[ENV]
+module purge
+#module use ${JARVIS_ROOT}/software/modulefiles
+#module add bisheng2/2.1.0
+#export CC=clang CXX=clang++ FC=flang
+
+[APP]
+app_name = gatk
+build_dir = ${JARVIS_ROOT}
+binary_dir = 
+case_dir = 
+
+[BUILD]
+mkdir -p $JARVIS_ROOT/software/apps/bisheng2/gatk/4.0.0.0
+unzip ${JARVIS_DOWNLOAD}/gatk-4.0.0.0.zip  -d $JARVIS_ROOT/software/apps/bisheng2/gatk/4.0.0.0
+
+[RUN]
+run = 
+binary = 
+node = 1
diff --git a/templates/gatk/4.0.0.0/data.gatk.arm.cpu.config.bak b/templates/gatk/4.0.0.0/data.gatk.arm.cpu.config.bak
new file mode 100644
index 0000000000000000000000000000000000000000..ac4e10a117cc7f339098db88cfef99bb54c64326
--- /dev/null
+++ b/templates/gatk/4.0.0.0/data.gatk.arm.cpu.config.bak
@@ -0,0 +1,27 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+gtak/4.0.0 https://github.com/broadinstitute/gatk/releases/download/4.0.0.0/gatk-4.0.0.0.zip
+
+[DEPENDENCY]
+
+[ENV]
+module purge
+module use ${JARVIS_ROOT}/software/modulefiles
+module add bisheng2/2.1.0
+export CC=clang CXX=clang++ FC=flang
+
+[APP]
+app_name = gatk
+build_dir = ${JARVIS_ROOT}
+binary_dir = 
+case_dir = 
+
+[BUILD]
+./jarvis -install gatk/4.0.0.0 clang
+
+[RUN]
+run = 
+binary = 
+node = 1
diff --git a/templates/grads/2.0.a4/data.grads.arm.cpu.config b/templates/grads/2.0.a4/data.grads.arm.cpu.config
index d0db6b6976ad11d3892b088e325b7c3c197dde35..ad86d9303c5fc2300338ce6df45b891d6b30d7e6 100644
--- a/templates/grads/2.0.a4/data.grads.arm.cpu.config
+++ b/templates/grads/2.0.a4/data.grads.arm.cpu.config
@@ -3,7 +3,7 @@
 
 [DOWNLOAD]
 grads/2.0.a4 https://sourceforge.net/projects/opengrads/files/grads2/2.0.a4-1/grads-2.0.a4.oga.1-src.tar.gz
-bisheng/2.1.0 https://mirrors.huaweicloud.com/kunpeng/archive/compiler/bisheng_compiler/bisheng-compiler-2.1.0-aarch64-linux.tar.gz
+
 
 [DEPENDENCY]
 module use ./software/modulefiles
diff --git a/templates/hdf5/1.10.1/data.hdf5.arm.cpu.config b/templates/hdf5/1.10.1/data.hdf5.arm.cpu.config
index b519741c5dd5cd930117bb876a39bc50b2eb0ae1..9fda53ba43f12dfda47b6da518c1b82d723a30bc 100644
--- a/templates/hdf5/1.10.1/data.hdf5.arm.cpu.config
+++ b/templates/hdf5/1.10.1/data.hdf5.arm.cpu.config
@@ -2,11 +2,7 @@
 11.11.11.11
 
 [DOWNLOAD]
-zlib/1.2.11 https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.1/src/hdf5-1.10.1.tar.gz
-bisheng/2.1.0 https://mirrors.huaweicloud.com/kunpeng/archive/compiler/bisheng_compiler/bisheng-compiler-2.1.0-aarch64-linux.tar.gz
-hucx/1.1.1 https://github.com/kunpengcompute/hucx/archive/refs/tags/v1.1.1-huawei.zip hucx-1.1.1-huawei.zip
-xucg/1.1.1 https://github.com/kunpengcompute/xucg/archive/refs/tags/v1.1.1-huawei.zip xucg-1.1.1-huawei.zip
-hmpi/1.1.1 https://github.com/kunpengcompute/hmpi/archive/refs/tags/v1.1.1-huawei.zip hmpi-1.1.1-huawei.zip
+hdf5/1.10.1 https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.1/src/hdf5-1.10.1.tar.gz
 
 [DEPENDENCY]
 module use ./software/modulefiles
@@ -15,12 +11,12 @@ module purge
 module load bisheng2/2.1.0
 export CC=clang CXX=clang++ FC=flang
 ./jarvis -install hmpi/1.1.1 clang
-module load hmpi1/1.1.1
 
 [ENV]
 module purge
 module use ${JARVIS_ROOT}/software/modulefiles
 module add bisheng2/2.1.0
+module load hmpi1/1.1.1
 export CC=mpicc CXX=mpicxx FC=mpifort F77=mpifort
 
 [APP]
@@ -30,7 +26,7 @@ binary_dir =
 case_dir = 
 
 [BUILD]
-./jarvis -install hdf5/1.10.1 clang
+./jarvis -install hdf5/1.10.1 clang+mpi
 
 [RUN]
 run = 
diff --git a/templates/opencv/4.5.5/data.opencv.arm.cpu.config b/templates/opencv/4.5.5/data.opencv.arm.cpu.config
new file mode 100644
index 0000000000000000000000000000000000000000..d73dd54cdfda5e775fb43a97330906531013ec7a
--- /dev/null
+++ b/templates/opencv/4.5.5/data.opencv.arm.cpu.config
@@ -0,0 +1,30 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+opencv/4.5.5 https://github.com/opencv/opencv/archive/refs/tags/4.5.5.tar.gz opencv-4.5.5.tar.gz
+
+[DEPENDENCY]
+module use ./software/modulefiles
+module purge
+./jarvis -install bisheng/2.1.0 com
+
+[ENV]
+module purge
+module use ${JARVIS_ROOT}/software/modulefiles
+module add bisheng2/2.1.0
+export CC=clang CXX=clang++ FC=flang
+
+[APP]
+app_name = opencv
+build_dir = ${JARVIS_ROOT}
+binary_dir = 
+case_dir = 
+
+[BUILD]
+./jarvis -install opencv/4.5.5 clang
+
+[RUN]
+run = 
+binary = 
+node = 1
diff --git a/templates/relion/3.1.2/data.relion.arm.cpu.config b/templates/relion/3.1.2/data.relion.arm.cpu.config
new file mode 100644
index 0000000000000000000000000000000000000000..c532829c36063c65183cec2fb127037064c30265
--- /dev/null
+++ b/templates/relion/3.1.2/data.relion.arm.cpu.config
@@ -0,0 +1,50 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+relion/3.1.2 https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz 
+
+[DEPENDENCY]
+module use ./software/modulefiles
+module purge
+./jarvis -install bisheng/2.1.0 com
+module add bisheng2/2.1.0
+export CC=clang CXX=clang++ FC=flang
+./jarvis -install wxWidgets/3.0.5 clang
+module add wxWidgets/3.0.5
+./jarvis -install ctffind/4.1.14/clang clang
+./jarvis -install hmpi/1.1.1 clang
+
+[ENV]
+module purge
+module use ${JARVIS_ROOT}/software/modulefiles
+module add bisheng2/2.1.0
+module add wxWidgets/3.0.5
+module add ctffind-clang/4.1.14
+module add hmpi1/1.1.1
+export CC=clang CXX=clang++ FC=flang
+
+[APP]
+app_name = relion
+build_dir = ${JARVIS_ROOT}
+binary_dir = 
+case_dir = 
+
+[BUILD]
+#./jarvis -install relion/3.1.2 clang+mpi
+cd ${JARVIS_TMP}
+rm -rf relion-3.1.2
+tar -xvf ${JARVIS_DOWNLOAD}/relion-3.1.2.tar.gz
+cd relion-3.1.2
+mkdir build && cd build
+#yum install -y libtiff-* fltk* fltk-devel*
+#yum -y install xorg-x11-xauth
+cmake -DCUDA=OFF  -DBUILD_SHARED_LIBS=OFF -DCMAKE_BUILD_TYPE=release  -DCMAKE_INSTALL_PREFIX=${JARVIS_ROOT}/software/apps/relion/3.1.2  ..
+make -j
+make install
+
+
+[RUN]
+run = 
+binary = 
+node = 1
diff --git a/templates/wxWidgets/3.0.5/data.wxWidgets.arm.cpu.config b/templates/wxWidgets/3.0.5/data.wxWidgets.arm.cpu.config
new file mode 100644
index 0000000000000000000000000000000000000000..bd364808545fc0db49d8a69814ccfda8b0f8de76
--- /dev/null
+++ b/templates/wxWidgets/3.0.5/data.wxWidgets.arm.cpu.config
@@ -0,0 +1,31 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+wxWidgets/3.0.5 https://github.com/wxWidgets/wxWidgets/archive/refs/tags/v3.0.5.tar.gz wxWidgets-3.0.5.tar.gz
+
+[DEPENDENCY]
+module use ./software/modulefiles
+module purge
+./jarvis -install bisheng/2.1.0 com
+
+
+[ENV]
+module purge
+module use ${JARVIS_ROOT}/software/modulefiles
+module add bisheng2/2.1.0
+export CC=clang CXX=clang++ FC=flang
+
+[APP]
+app_name = wxWidgets
+build_dir = ${JARVIS_ROOT}
+binary_dir = 
+case_dir = 
+
+[BUILD]
+./jarvis -install wxWidgets/3.0.5 clang
+
+[RUN]
+run = 
+binary = 
+node = 1