diff --git a/templates/plink/1.9/data.plink.arm-920.cpu.config b/templates/plink/1.9/data.plink.arm-920.cpu.config new file mode 100644 index 0000000000000000000000000000000000000000..93a82925c8d0405ca2fdac5642e66a42d48aee20 --- /dev/null +++ b/templates/plink/1.9/data.plink.arm-920.cpu.config @@ -0,0 +1,55 @@ +[SERVER] +11.11.11.11 + +[DOWNLOAD] +plink/1.9 https://github.com/chrchang/plink-ng/archive/refs/heads/master.zip plink-master.zip + +[DEPENDENCY] +yum install make cmake gcc g++ -y +dnf install openblas-devel zstd-devel zlib-devel -y + +module purge +./jarvis -install hpckit/2024.12.30 com +module use ./software/compiler/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles +module load gcc/compiler12.3.1/gccmodule +module load gcc/kml2.5.0/kml + +cd ${JARVIS_TMP_DOWNLOAD} +rm -rf plink-ng-master +unzip ${JARVIS_DOWNLOAD}/plink-master.zip + +[ENV] +module purge +module use ./software/compiler/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles +module load gcc/compiler12.3.1/gccmodule +module load gcc/kml2.5.0/kml + +[APP] +app_name = plink +build_dir = ${JARVIS_TMP_DOWNLOAD}/plink-ng-master +binary_dir = ${JARVIS_TMP_DOWNLOAD}/plink-ng-master/bin +case_dir = + +[BUILD] +grep -rl "\-llapack -lblas -lcblas -latlas" | xargs sed -i 's%\-llapack -lblas -lcblas -latlas%-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g' +grep -rl "\-llapack -lcblas -lblas" | xargs sed -i 's%\-llapack -lcblas -lblas%\-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g' +grep -rl "\-llapack -lf77blas -latlas" | xargs sed -i 's%\-llapack -lf77blas -latlas%\-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g' +sed -i 's%cblas.h%kblas.h%g' 1.9/plink_matrix.h +sed -i 's%cblas.h%kblas.h%g' 2.0/plink2_matrix.h +cd 1.9/ +./plink_first_compile +cd ../2.0 +./build.sh + +[CLEAN] +make clean + +[RUN] +run = +binary = +nodes = 1 + +[PERF] +perf= +nsys= +ncu=