From 39f4df01a41b3fec67298091bdce59741c307cd3 Mon Sep 17 00:00:00 2001
From: Zerry <996002763@qq.com>
Date: Fri, 11 Apr 2025 11:14:14 +0800
Subject: [PATCH 1/2] =?UTF-8?q?=E6=96=B0=E5=A2=9E=E5=BA=94=E7=94=A8plink-1?=
 =?UTF-8?q?.9?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 .../plink/1.9/data.plink.arm-920.cpu.config   | 57 +++++++++++++++++++
 1 file changed, 57 insertions(+)
 create mode 100644 templates/plink/1.9/data.plink.arm-920.cpu.config

diff --git a/templates/plink/1.9/data.plink.arm-920.cpu.config b/templates/plink/1.9/data.plink.arm-920.cpu.config
new file mode 100644
index 0000000..f4aace9
--- /dev/null
+++ b/templates/plink/1.9/data.plink.arm-920.cpu.config
@@ -0,0 +1,57 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+plink/1.9 https://github.com/chrchang/plink-ng/archive/refs/heads/master.zip plink-master.zip
+
+[DEPENDENCY]
+yum install make cmake gcc g++ -y
+dnf install openblas-devel -y
+
+module purge
+./jarvis -install hpckit/2024.12.30 com
+module use ./software/compiler/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles
+module load gcc/compiler12.3.1/gccmodule
+module load gcc/kml2.5.0/kml
+
+cd ${JARVIS_TMP_DOWNLOAD}
+unzip ${JARVIS_DOWNLOAD}/plink-master.zip
+
+[ENV]
+module purge
+module use ./software/compiler/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles
+module load gcc/compiler12.3.1/gccmodule
+module load gcc/kml2.5.0/kml
+
+[APP]
+app_name = plink
+build_dir = ${JARVIS_TMP_DOWNLOAD}
+binary_dir = ${JARVIS_TMP_DOWNLOAD}
+case_dir = 
+
+[BUILD]
+
+cd plink-ng-master
+
+grep -rl "\-llapack -lblas -lcblas -latlas" | xargs sed -i 's%\-llapack -lblas -lcblas -latlas%-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g'
+grep -rl "\-llapack -lcblas -lblas" | xargs sed -i 's%\-llapack -lcblas -lblas%\-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g'
+grep -rl "\-llapack -lf77blas -latlas" | xargs sed -i 's%\-llapack -lf77blas -latlas%\-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g'
+sed -i 's%cblas.h%kblas.h%g' 1.9/plink_matrix.h
+sed -i 's%cblas.h%kblas.h%g' 2.0/plink2_matrix.h
+cd 1.9/
+./plink_first_compile
+cd ../2.0
+./build.sh
+
+[CLEAN]
+make clean
+
+[RUN]
+run = 
+binary = 
+nodes = 1
+
+[PERF]
+perf=
+nsys=
+ncu=
-- 
Gitee


From 1e748cee727b92ecf392b587ae3fd0ae974395ec Mon Sep 17 00:00:00 2001
From: Zerry <996002763@qq.com>
Date: Fri, 11 Apr 2025 11:14:14 +0800
Subject: [PATCH 2/2] =?UTF-8?q?=E6=96=B0=E5=A2=9E=E5=BA=94=E7=94=A8plink-1?=
 =?UTF-8?q?.9?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

---
 .../plink/1.9/data.plink.arm-920.cpu.config   | 56 +++++++++++++++++++
 1 file changed, 56 insertions(+)
 create mode 100644 templates/plink/1.9/data.plink.arm-920.cpu.config

diff --git a/templates/plink/1.9/data.plink.arm-920.cpu.config b/templates/plink/1.9/data.plink.arm-920.cpu.config
new file mode 100644
index 0000000..1c3d77b
--- /dev/null
+++ b/templates/plink/1.9/data.plink.arm-920.cpu.config
@@ -0,0 +1,56 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+plink/1.9 https://github.com/chrchang/plink-ng/archive/refs/heads/master.zip plink-master.zip
+
+[DEPENDENCY]
+yum install make cmake gcc g++ -y
+dnf install openblas-devel -y
+
+module purge
+./jarvis -install hpckit/2024.12.30 com
+module use ./software/compiler/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles
+module load gcc/compiler12.3.1/gccmodule
+module load gcc/kml2.5.0/kml
+
+cd ${JARVIS_TMP_DOWNLOAD}
+rm -rf plink-ng-master
+unzip ${JARVIS_DOWNLOAD}/plink-master.zip
+
+[ENV]
+module purge
+module use ./software/compiler/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles
+module load gcc/compiler12.3.1/gccmodule
+module load gcc/kml2.5.0/kml
+
+[APP]
+app_name = plink
+build_dir = ${JARVIS_TMP_DOWNLOAD}/plink-ng-master
+binary_dir = ${JARVIS_TMP_DOWNLOAD}/plink-ng-master/bin
+case_dir = 
+
+[BUILD]
+
+grep -rl "\-llapack -lblas -lcblas -latlas" | xargs sed -i 's%\-llapack -lblas -lcblas -latlas%-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g'
+grep -rl "\-llapack -lcblas -lblas" | xargs sed -i 's%\-llapack -lcblas -lblas%\-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g'
+grep -rl "\-llapack -lf77blas -latlas" | xargs sed -i 's%\-llapack -lf77blas -latlas%\-L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon/kblas/pthread -L\${JARVIS_COMPILER}/hpckit/2024.12.30/HPCKit/24.12.30/kml/gcc/lib/neon -lkblas -lklapack_full -fopenmp%g'
+sed -i 's%cblas.h%kblas.h%g' 1.9/plink_matrix.h
+sed -i 's%cblas.h%kblas.h%g' 2.0/plink2_matrix.h
+cd 1.9/
+./plink_first_compile
+cd ../2.0
+./build.sh
+
+[CLEAN]
+make clean
+
+[RUN]
+run = 
+binary = 
+nodes = 1
+
+[PERF]
+perf=
+nsys=
+ncu=
-- 
Gitee