diff --git a/templates/tophat/2.1.1/tophat.arm.kgcc.hmpi.py27.config b/templates/tophat/2.1.1/tophat.arm.kgcc.hmpi.py27.config
new file mode 100644
index 0000000000000000000000000000000000000000..9107a37a98dfb182441790d56761c72cb4f04257
--- /dev/null
+++ b/templates/tophat/2.1.1/tophat.arm.kgcc.hmpi.py27.config
@@ -0,0 +1,60 @@
+[SERVER]
+11.11.11.11
+
+[DOWNLOAD]
+TopHat/2.1.1 https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz
+test_data/ https://ccb.jhu.edu/software/tophat/downloads/test_data.tar.gz
+
+[DEPENDENCY]
+module purge
+module use ./software/modulefiles
+./jarvis -install kgcc/10.3.1 com
+module load kgcc/10.3.1
+./jarvis -install hmpi/2.4.2 gcc
+module load hmpi/2.4.2
+sed -i '/cd Python-2.7.16/a sed -i "s/-fp-model strict/-ffloat-store/" configure' ${JARVIS_ROOT}/package/python2/2.7.16/install.sh
+./jarvis -install python2/2.7.16 gcc+mpi
+module load python2/2.7.16
+sed -i '/cd bowtie2-2.4.5/a sed -i "s/zlib.net/zlib.net\\/fossils/g" Makefile' ${JARVIS_ROOT}/package/bowtie2/2.4.5/install.sh
+sed -i 's/-stdlib=libc++/-stdlib=libstdc++/g' ${JARVIS_ROOT}/package/bowtie2/2.4.5/install.sh
+./jarvis -install bowtie2/2.4.5 gcc+mpi
+export PATH=/opt/hpcrunner/software/libs/bisheng2.1.0/bowtie2/2.4.5/bin:$PATH
+sed -i 's/python3/python2/g' ${JARVIS_ROOT}/package/boost-python/1.72.0/install.sh
+sed -i 's/\.\/bootstrap.sh/\.\/bootstrap.sh --with-libraries=system,thread/' ${JARVIS_ROOT}/package/boost-python/1.72.0/install.sh
+./jarvis -install boost-python/1.72.0 gcc+mpi
+module load boost-python/1.72.0
+
+mkdir -p ${JARVIS_ROOT}/software/apps/tophat
+tar -zxvf ${JARVIS_DOWNLOAD}/tophat-2.1.1.tar.gz -C ${JARVIS_TMP_DOWNLOAD}
+tar -zxvf ${JARVIS_DOWNLOAD}/test_data.tar.gz -C ${JARVIS_TMP_DOWNLOAD}/tophat-2.1.1/
+
+[ENV]
+module purge
+module use ./software/modulefiles
+module load kgcc/10.3.1
+module load hmpi/2.4.2
+module load python2/2.7.16
+export PATH=/opt/hpcrunner/software/libs/bisheng2.1.0/bowtie2/2.4.5/bin:$PATH
+module load boost-python/1.72.0
+
+[APP]
+app_name = tophat
+build_dir = ${JARVIS_TMP_DOWNLOAD}/tophat-2.1.1
+binary_dir = ${JARVIS_ROOT}/software/apps/tophat/bin
+case_dir = ${JARVIS_TMP_DOWNLOAD}/tophat-2.1.1/test_data
+
+[BUILD]
+sed -i 's/^CC=.*/CC=             mpicc/' src/samtools-0.1.18/Makefile
+sed -i 's/^CC=.*/CC=             mpicc/' src/samtools-0.1.18/bcftools/Makefile
+sed -i 's/<Junction, JunctionStats>//g' src/tophat_reports.cpp
+PYTHON=`which python3` CC=`which mpicc` CXX=`which mpicxx` ./configure --prefix=${JARVIS_ROOT}/software/apps/tophat --with-boost=${JARVIS_LIBS}/kgcc10.3.1/hmpi2.4.2/boost-python/1.72.0
+make
+make install
+
+[CLEAN]
+make clean
+
+[RUN]
+run = 
+binary = tophat -r 20 test_ref reads_1.fq reads_2.fq
+nodes = 1