diff --git a/templates/minimap2/master/data.minimap2.arm.cpu.bisheng.config b/templates/minimap2/master/data.minimap2.arm.cpu.bisheng.config new file mode 100644 index 0000000000000000000000000000000000000000..617f3264bc90b4cac19e13c11a8f68216e403cbe --- /dev/null +++ b/templates/minimap2/master/data.minimap2.arm.cpu.bisheng.config @@ -0,0 +1,45 @@ +[SERVER] +11.11.11.11 + +[DOWNLOAD] +minimap2/master https://github.com/lh3/minimap2/archive/master.zip minimap2-master.zip + +[DEPENDENCY] +set -e +set -x + +./jarvis -install hpckit/2024.12.30 any +module use software/utils/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles +module purge +module add bisheng/compiler4.1.0/bishengmodule +yum install wget git gcc-c++ zlib -y +unzip ${JARVIS_DOWNLOAD}/minimap2-master.zip + +[ENV] +module use software/utils/hpckit/2024.12.30/HPCKit/24.12.30/modulefiles +module purge +module add bisheng/compiler4.1.0/bishengmodule + +[APP] +app_name = minimap2 +build_dir = ${JARVIS_ROOT}/minimap2-master/ +binary_dir = ${JARVIS_ROOT}/minimap2-master/ +case_dir = ${JARVIS_ROOT}/minimap2-master/ + +[BUILD] +make arm_neon=1 aarch64=1 +./minimap2 --v + + +[CLEAN] + +[RUN] +run = +binary = ./minimap2 -a test/MT-human.fa test/MT-orang.fa > test.sam +nodes = 1 + +[PERF] +perf= +nsys= +ncu=--target-processes all +