From 4cffe23d424d1f5b88d62127313381745e642e21 Mon Sep 17 00:00:00 2001 From: cfmin <1163105507@qq.com> Date: Fri, 13 Jun 2025 16:01:00 +0800 Subject: [PATCH] Add templates app foldseek --- .../10-941cd33/foldseek.arm.kgcc.hmpi.config | 34 +++++++++++++++++++ 1 file changed, 34 insertions(+) create mode 100755 templates/foldseek/10-941cd33/foldseek.arm.kgcc.hmpi.config diff --git a/templates/foldseek/10-941cd33/foldseek.arm.kgcc.hmpi.config b/templates/foldseek/10-941cd33/foldseek.arm.kgcc.hmpi.config new file mode 100755 index 0000000..6559825 --- /dev/null +++ b/templates/foldseek/10-941cd33/foldseek.arm.kgcc.hmpi.config @@ -0,0 +1,34 @@ +[SERVER] +11.11.11.11 + +[DOWNLOAD] +foldseek/10 https://mmseqs.com/foldseek/foldseek-linux-arm64.tar.gz +example/ https://raw.githubusercontent.com/steineggerlab/foldseek/refs/tags/10-941cd33/example/d1asha_ + +[DEPENDENCY] +set -e + +mkdir -p ${JARVIS_ROOT}/software/app +tar -zxvf ${JARVIS_DOWNLOAD}/foldseek-linux-arm64.tar.gz -C ${JARVIS_ROOT}/software/app + +[ENV] +module purge +module use ./software/modulefiles +module load kgcc/10.3.1 +module load hmpi/2.4.2 + +[APP] +app_name = foldseek +build_dir = +binary_dir = ${JARVIS_ROOT}/software/app/foldseek/bin +case_dir = ${JARVIS_ROOT}/software/app/foldseek + +[BUILD] + +[CLEAN] + +[RUN] +run = mkdir -p example && cp -ar ${JARVIS_DOWNLOAD}/d1asha_ ./example/ && +binary = foldseek easy-search example/d1asha_ example/ result.html tmp --format-mode 3 +#浏览器访问生成的html文件 +nodes = 1 -- Gitee