From c5c3ebb4c9acab4845b5708c0f24b8b4ef7edeab Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?=E9=AB=98=E6=96=87=E5=B0=A7?= <2794580162@qq.com>
Date: Tue, 15 Jul 2025 10:08:11 +0800
Subject: [PATCH 1/2] nco

---
 templates/nco/5.1.4/data.NCO.arm.cpu.config | 59 +++++++++------------
 1 file changed, 24 insertions(+), 35 deletions(-)

diff --git a/templates/nco/5.1.4/data.NCO.arm.cpu.config b/templates/nco/5.1.4/data.NCO.arm.cpu.config
index 14116d5..ac8a4cf 100644
--- a/templates/nco/5.1.4/data.NCO.arm.cpu.config
+++ b/templates/nco/5.1.4/data.NCO.arm.cpu.config
@@ -7,61 +7,58 @@ NCO/5.1.4 https://sourceforge.net/projects/nco/files/nco-5.1.4.tar.gz
 [DEPENDENCY]
 set -e
 set -x
+
 module purge
 ./jarvis -install bisheng/2.3.0 com
 module use ./software/modulefiles
 module load bisheng/2.3.0
-sed -i '9c ./configure --prefix=$1 CFLAGS="-fPIC"' package/libjpeg/v9b/install.sh 
+export CC=`which clang`
+export CXX=`which clang++`
+export FC=`which flang`
 ./jarvis -install libjpeg/v9b bisheng
 ./jarvis -install hmpi/1.2.0 bisheng
 module load libjpeg/v9b
-
-
 module load hmpi/1.2.0
-CC=`which mpicc`
 ./jarvis -install hdf5/1.12.0/clang bisheng
 module load hdf5-clang/1.12.0
 ./jarvis -install hdf4/4.2.13 bisheng
 module load hdf4/4.2.13
-./jarvis -install hdf4/ bisheng
-sed -i '21c ./configure --prefix=$1 ${build_type} --enable-shared --enable-netcdf-4 --disable-dap --with-pic --disable-doxygen --enable-static --disable-pnetcdf --enable-largefile CPPFLAGS="-O3 -I${HMPI_PATH}/include -I${HDF5_CLANG_PATH}/include -I${PNETCDF_DIR}/include" LDFLAGS="-L${HDF5_CLANG_PATH}/lib -L${PNETCDF_DIR}/lib -Wl,-rpath=${HDF5_CLANG_PATH}/lib -Wl,-rpath=${PNETCDF_DIR}/lib" CFLAGS="-O3 -L${HDF5_CLANG_PATH}/lib -L${PNETCDF_DIR}/lib -I${HDF5_CLANG_PATH}/include -I${PNETCDF_DIR}/include"' package/netcdf/4.7.4/install.sh
-sed -i '5c hdf5_version="${hdf5_big_version}.0"' package/hdf5/1.12.0/install.sh
-CC=`which mpicc` ./jarvis -install hdf5/1.12.0 bisheng
-module load hdf5/1.12.0
-./jarvis -install hdf4/4.2.13/ bisheng
-module load hdf4/4.2.13
-sed -i '21c ./configure --prefix=$1 ${build_type} --enable-shared --enable-netcdf-4 --disable-dap --with-pic --disable-doxygen --enable-static --disable-pnetcdf --enable-largefile CPPFLAGS="-O3 -I${HMPI_PATH}/include -I${HDF5_DIR}/include -I${PNETCDF_DIR}/include" LDFLAGS="-L${HDF5_DIR}/lib -L${PNETCDF_DIR}/lib -Wl,-rpath=${HDF5_DIR}/lib -Wl,-rpath=${PNETCDF_DIR}/lib" CFLAGS="-O3 -L${HDF5_DIR}/lib -L${PNETCDF_DIR}/lib -I${HDF5_DIR}/include -I${PNETCDF_DIR}/include"' package/netcdf/4.7.4/install.sh
-./jarvis -install netcdf/4.7.4 bisheng
-module load netcdf/4.7.4
+./jarvis -install pnetcdf/1.12.1 bisheng
+module load pnetcdf/1.12.1
 ./jarvis -install gsl/2.6 bisheng
-sed -i '14c --disable-python --build=arm-linux' package/antlr/2.7.7/install.sh
+module load gsl/2.6
 ./jarvis -install antlr/2.7.7 bisheng
+module load antlr/2.7.7
 ./jarvis -install udunits/2.2.28 bisheng
+module load udunits/2.2.28
+./jarvis -install netcdf/4.7.4/clang clang+mpi
+module use ./software/moduledeps/bisheng2.3.0-hmpi1.2.0
+module load netcdf-clang/4.7.4
 
 
 [ENV]
 module purge
 module use ./software/modulefiles
-
 module load bisheng/2.3.0
+export CC=`which clang`
+export CXX=`which clang++`
+export FC=`which flang`
+module load libjpeg/v9b
 module load hmpi/1.2.0
 module load hdf5-clang/1.12.0
 module load hdf4/4.2.13
-module load netcdf/4.7.4
+module load pnetcdf/1.12.1
 module load gsl/2.6
-module load antlr/2.7.7 
+module load antlr/2.7.7
 module load udunits/2.2.28
-
-export CC=`which clang`
-export CXX=`which clang++`
-export FC=`which flang`
-
+module use ./software/moduledeps/bisheng2.3.0-hmpi1.2.0
+module load netcdf-clang/4.7.4
 
 
 
 [APP]
 app_name = NCO
-build_dir = ${JARVIS_TMP}/nco-5.1.4
+build_dir = ${JARVIS_TMP}/
 binary_dir = ${JARVIS_LIBS}/bisheng2.3.0/nco/bin
 case_dir = ${JARVIS_LIBS}/bisheng2.3.0/nco/bin
 
@@ -72,18 +69,10 @@ rm -rf nco-5.1.4
 tar zxvf ${JARVIS_DOWNLOAD}/nco-5.1.4.tar.gz
 cd nco-5.1.4
 echo ${UDUNITS_PATH}
-export NETCDF_INC=${NETCDF_PATH}/include 
-export NETCDF_LIB=${NETCDF_PATH}/lib 
-./configure CPPFLAGS="-I${ANTLR_PATH}/include -I${UDUNITS_PATH}/include" CFLAGS="-L${ANTLR_PATH}/lib -I${NETCDF_PATH}/include -I${UDUNITS_PATH}/include -L${UDUNITS_PATH}/lib " --prefix=${JARVIS_LIBS}/bisheng2.3.0/nco
+export NETCDF_INC=${NETCDF_CLANG_PATH}/include
+export NETCDF_LIB=${NETCDF_CLANG_PATH}/lib
+./configure CPPFLAGS="-I${ANTLR_PATH}/include -I${UDUNITS_PATH}/include" CFLAGS="-L${ANTLR_PATH}/lib -I${NETCDF_CLANG_PATH}/include -I${UDUNITS_PATH}/include -L${UDUNITS_PATH}/lib " --prefix=${JARVIS_LIBS}/bisheng2.3.0/nco
 make
 make install
 
 
-
-
-
-[RUN]
-run =  ./ncap2 -v
-binary = 
-nodes = 1
-
-- 
Gitee


From 5fda0a4c5d3d3abdb54ae81aded9e4501fb1fcfe Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?=E9=AB=98=E6=96=87=E5=B0=A7?= <2794580162@qq.com>
Date: Tue, 15 Jul 2025 10:41:39 +0800
Subject: [PATCH 2/2] nco

---
 templates/nco/5.1.4/data.NCO.arm.cpu.config | 4 ++++
 1 file changed, 4 insertions(+)

diff --git a/templates/nco/5.1.4/data.NCO.arm.cpu.config b/templates/nco/5.1.4/data.NCO.arm.cpu.config
index ac8a4cf..38aa208 100644
--- a/templates/nco/5.1.4/data.NCO.arm.cpu.config
+++ b/templates/nco/5.1.4/data.NCO.arm.cpu.config
@@ -75,4 +75,8 @@ export NETCDF_LIB=${NETCDF_CLANG_PATH}/lib
 make
 make install
 
+[RUN]
+run =  ./ncap2 -v
+binary = 
+nodes = 1
 
-- 
Gitee