diff --git a/templates/relion/3.1.2/data.relion.mini.all.arm.cpu.config b/templates/relion/3.1.2/data.relion.mini.all.arm.cpu.config index 89f3b750eba911f879f4713d474141ef605f6519..917982dd8240fd3077f4560d14ada9b3f4aef979 100644 --- a/templates/relion/3.1.2/data.relion.mini.all.arm.cpu.config +++ b/templates/relion/3.1.2/data.relion.mini.all.arm.cpu.config @@ -5,26 +5,28 @@ relion/3.1.2 https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz [DEPENDENCY] -module use ./software/modulefiles +yum install -y cmake module purge -./jarvis -install bisheng/3.2.0-mini com -module add bisheng/3.2.0-mini +./jarvis -install hpckit/${HPCKIT_VERSION} any +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang ./jarvis -install wxWidgets/3.0.5 clang -module use ./software/moduledeps/bisheng3.2.0 -module add wxWidgets/3.0.5 +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 ./jarvis -install ctffind/4.1.14/clang clang -./jarvis -install hmpi/2.3.0 clang +module load ctffind-clang/4.1.14 [ENV] module purge -module use software/modulefiles -module use software/moduledeps/bisheng3.2.0 -module add bisheng/3.2.0-mini -module add wxWidgets/3.0.5 -module add ctffind-clang/4.1.14 -module add hmpi/2.3.0 +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 +module load ctffind-clang/4.1.14 [APP] app_name = relion @@ -57,3 +59,4 @@ make install run = binary = nodes = 1 + diff --git a/templates/relion/3.1.2/data.relion.mini.all.sve.arm.cpu.config b/templates/relion/3.1.2/data.relion.mini.all.sve.arm.cpu.config index ed55a679a3077ead6765d59fc794f61a8c64d5aa..7e5cd8166ed571e33ac129fbf123b02b05cf2820 100644 --- a/templates/relion/3.1.2/data.relion.mini.all.sve.arm.cpu.config +++ b/templates/relion/3.1.2/data.relion.mini.all.sve.arm.cpu.config @@ -5,26 +5,28 @@ relion/3.1.2 https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz [DEPENDENCY] -module use ./software/modulefiles +yum install -y cmake module purge -./jarvis -install bisheng/3.2.0-mini com -module add bisheng/3.2.0-mini +./jarvis -install hpckit/${HPCKIT_VERSION} any +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang ./jarvis -install wxWidgets/3.0.5 clang -module use ./software/moduledeps/bisheng3.2.0 -module add wxWidgets/3.0.5 +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 ./jarvis -install ctffind/4.1.14/clang clang -./jarvis -install hmpi/2.3.0 clang +module load ctffind-clang/4.1.14 [ENV] module purge -module use software/modulefiles -module use software/moduledeps/bisheng3.2.0 -module add bisheng/3.2.0-mini -module add wxWidgets/3.0.5 -module add ctffind-clang/4.1.14 -module add hmpi/2.3.0 +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 +module load ctffind-clang/4.1.14 [APP] app_name = relion @@ -53,3 +55,4 @@ make install run = binary = nodes = 1 + diff --git a/templates/relion/3.1.2/data.relion.mini.altcpu.arm.cpu.config b/templates/relion/3.1.2/data.relion.mini.altcpu.arm.cpu.config index 99d40da83f02c6c251a4d57e9f1db6a37b4e6352..3b2c5b9f40f69bd1421d27e137f1ffcab7135505 100644 --- a/templates/relion/3.1.2/data.relion.mini.altcpu.arm.cpu.config +++ b/templates/relion/3.1.2/data.relion.mini.altcpu.arm.cpu.config @@ -5,26 +5,28 @@ relion/3.1.2 https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz [DEPENDENCY] -module use ./software/modulefiles +yum install -y cmake module purge -./jarvis -install bisheng/3.2.0-mini com -module add bisheng/3.2.0-mini +./jarvis -install hpckit/${HPCKIT_VERSION} any +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang ./jarvis -install wxWidgets/3.0.5 clang -module use ./software/moduledeps/bisheng3.2.0 -module add wxWidgets/3.0.5 +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 ./jarvis -install ctffind/4.1.14/clang clang -./jarvis -install hmpi/2.3.0 clang +module load ctffind-clang/4.1.14 [ENV] module purge -module use software/modulefiles -module use software/moduledeps/bisheng3.2.0 -module add bisheng/3.2.0-mini -module add wxWidgets/3.0.5 -module add ctffind-clang/4.1.14 -module add hmpi/2.3.0 +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 +module load ctffind-clang/4.1.14 [APP] app_name = relion @@ -57,3 +59,4 @@ make install run = binary = nodes = 1 + diff --git a/templates/relion/3.1.2/data.relion.mini.arm.cpu.config b/templates/relion/3.1.2/data.relion.mini.arm.cpu.config index f9b2bfcdfde2823b1ea911b0f4fe6a4a252a35c0..bf58d4d6342383b7f5f3329cc6063dc062c7d5b7 100644 --- a/templates/relion/3.1.2/data.relion.mini.arm.cpu.config +++ b/templates/relion/3.1.2/data.relion.mini.arm.cpu.config @@ -5,26 +5,28 @@ relion/3.1.2 https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz [DEPENDENCY] -module use ./software/modulefiles +yum install -y cmake module purge -./jarvis -install bisheng/3.2.0-mini com -module add bisheng/3.2.0-mini +./jarvis -install hpckit/${HPCKIT_VERSION} any +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang ./jarvis -install wxWidgets/3.0.5 clang -module use ./software/moduledeps/bisheng3.2.0 -module add wxWidgets/3.0.5 +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 ./jarvis -install ctffind/4.1.14/clang clang -./jarvis -install hmpi/2.3.0 clang +module load ctffind-clang/4.1.14 [ENV] module purge -module use software/modulefiles -module use software/moduledeps/bisheng3.2.0 -module add bisheng/3.2.0-mini -module add wxWidgets/3.0.5 -module add ctffind-clang/4.1.14 -module add hmpi/2.3.0 +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 +module load ctffind-clang/4.1.14 [APP] app_name = relion @@ -53,3 +55,4 @@ make install run = binary = nodes = 1 + diff --git a/templates/relion/3.1.2/data.relion.mini.loop.arm.cpu.config b/templates/relion/3.1.2/data.relion.mini.loop.arm.cpu.config index ad8a650f83c5a93a08d04a3dd2ee55e6bceaadd9..02998ba0cb703aa9f6d6652fe6bfa3410e931e7a 100644 --- a/templates/relion/3.1.2/data.relion.mini.loop.arm.cpu.config +++ b/templates/relion/3.1.2/data.relion.mini.loop.arm.cpu.config @@ -5,26 +5,28 @@ relion/3.1.2 https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz [DEPENDENCY] -module use ./software/modulefiles +yum install -y cmake module purge -./jarvis -install bisheng/3.2.0-mini com -module add bisheng/3.2.0-mini +./jarvis -install hpckit/${HPCKIT_VERSION} any +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang ./jarvis -install wxWidgets/3.0.5 clang -module use ./software/moduledeps/bisheng3.2.0 -module add wxWidgets/3.0.5 +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 ./jarvis -install ctffind/4.1.14/clang clang -./jarvis -install hmpi/2.3.0 clang +module load ctffind-clang/4.1.14 [ENV] module purge -module use software/modulefiles -module use software/moduledeps/bisheng3.2.0 -module add bisheng/3.2.0-mini -module add wxWidgets/3.0.5 -module add ctffind-clang/4.1.14 -module add hmpi/2.3.0 +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 +module load ctffind-clang/4.1.14 [APP] app_name = relion @@ -58,3 +60,4 @@ make install run = binary = nodes = 1 + diff --git a/templates/relion/3.1.2/data.relion.mini.sve.arm.cpu.config b/templates/relion/3.1.2/data.relion.mini.sve.arm.cpu.config index 689593aa6f300c3bd282d1eb535721f9316b217b..51b9d59e72e1a5a15d60f403350a152feea21b8d 100644 --- a/templates/relion/3.1.2/data.relion.mini.sve.arm.cpu.config +++ b/templates/relion/3.1.2/data.relion.mini.sve.arm.cpu.config @@ -5,26 +5,28 @@ relion/3.1.2 https://github.com/3dem/relion/archive/refs/tags/3.1.2.tar.gz relion-3.1.2.tar.gz [DEPENDENCY] -module use ./software/modulefiles +yum install -y cmake module purge -./jarvis -install bisheng/3.2.0-mini com -module add bisheng/3.2.0-mini +./jarvis -install hpckit/${HPCKIT_VERSION} any +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang ./jarvis -install wxWidgets/3.0.5 clang -module use ./software/moduledeps/bisheng3.2.0 -module add wxWidgets/3.0.5 +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 ./jarvis -install ctffind/4.1.14/clang clang -./jarvis -install hmpi/2.3.0 clang +module load ctffind-clang/4.1.14 [ENV] module purge -module use software/modulefiles -module use software/moduledeps/bisheng3.2.0 -module add bisheng/3.2.0-mini -module add wxWidgets/3.0.5 -module add ctffind-clang/4.1.14 -module add hmpi/2.3.0 +module use ./software/utils/hpckit/${HPCKIT_VERSION}/HPCKit/${HPCKIT_VERSION}/modulefiles +module load bisheng/compiler${BISHENG_VERSION}/bishengmodule +module load bisheng/hmpi${HPCKIT_VERSION}/release export CC=clang CXX=clang++ FC=flang +module use ./software/moduledeps/bisheng${BISHENG_VERSION} +module load wxWidgets/3.0.5 +module load ctffind-clang/4.1.14 [APP] app_name = relion @@ -52,3 +54,4 @@ make install run = binary = nodes = 1 +