diff --git a/0001-fix-man-command.patch b/0001-fix-man-command.patch index 61aa3abd22bc430b6b7ae0313cbec06ac320827f..577159934293922ef996f2d71e545ba3536ae0fc 100644 --- a/0001-fix-man-command.patch +++ b/0001-fix-man-command.patch @@ -1,16 +1,15 @@ -From 41fe0c106c557048b7fbf7164e53aea9bdb8747a Mon Sep 17 00:00:00 2001 +From 71c9f56c29ffd280a56989825156b048d6f76f57 Mon Sep 17 00:00:00 2001 From: cherry530 <707078654@qq.com> -Date: Thu, 14 Sep 2023 18:54:55 +0800 +Date: Wed, 11 Dec 2024 11:43:31 +0800 Subject: [PATCH] fix man command -Signed-off-by: cherry530 <707078654@qq.com> --- README.md | 2 +- main.c | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md -index 13c4938..529f010 100644 +index c94ba85..ce8f3d1 100644 --- a/README.md +++ b/README.md @@ -25,7 +25,7 @@ cd minimap2 && make @@ -23,18 +22,18 @@ index 13c4938..529f010 100644 ## Table of Contents diff --git a/main.c b/main.c -index 0be9933..9385075 100644 +index 2fbfce1..33ddc8f 100644 --- a/main.c +++ b/main.c -@@ -366,7 +366,7 @@ int main(int argc, char *argv[]) - fprintf(fp_help, " - asm5/asm10/asm20 - asm-to-ref mapping, for ~0.1/1/5%% sequence divergence\n"); - fprintf(fp_help, " - splice/splice:hq - long-read/Pacbio-CCS spliced alignment\n"); - fprintf(fp_help, " - sr - genomic short-read mapping\n"); +@@ -381,7 +381,7 @@ int main(int argc, char *argv[]) + fprintf(fp_help, " - sr - short reads against a reference\n"); + fprintf(fp_help, " - map-pb/map-hifi/map-ont/map-iclr - CLR/HiFi/Nanopore/ICLR vs reference mapping\n"); + fprintf(fp_help, " - ava-pb/ava-ont - PacBio CLR/Nanopore read overlap\n"); - fprintf(fp_help, "\nSee `man ./minimap2.1' for detailed description of these and other advanced command-line options.\n"); + fprintf(fp_help, "\nSee `man minimap2.1' for detailed description of these and other advanced command-line options.\n"); return fp_help == stdout? 0 : 1; } -- -2.27.0 +2.46.0 diff --git a/minimap2-2.24.tar.gz b/minimap2-2.24.tar.gz deleted file mode 100644 index 7b4626ad52e68e42fc6d3cababcf8fe272d089e1..0000000000000000000000000000000000000000 Binary files a/minimap2-2.24.tar.gz and /dev/null differ diff --git a/minimap2-2.28.tar.gz b/minimap2-2.28.tar.gz new file mode 100644 index 0000000000000000000000000000000000000000..a211ed5a5cc3935979e98bb3b94031c5342008f6 Binary files /dev/null and b/minimap2-2.28.tar.gz differ diff --git a/minimap2.spec b/minimap2.spec index 269fefa32a00674145d0f5df198912b8390dda9e..1e1c0c1897c28bb54d99bca59db233b531904765 100644 --- a/minimap2.spec +++ b/minimap2.spec @@ -1,5 +1,5 @@ Name: minimap2 -Version: 2.24 +Version: 2.28 Release: 1 Summary: A versatile pairwise aligner for genomic and spliced nucleotide sequences License: MIT @@ -21,7 +21,7 @@ Minimap2 is a versatile sequence alignment program that aligns DNA or mRNA seque %prep %setup -q -n %{name}-%{version}/ -%patch0 -p1 +%patch 0 -p1 %build %{ENV} make extra @@ -41,6 +41,9 @@ cp ./minimap2.1 %{buildroot}%{_mandir}/man1/ %{_mandir}/* %changelog +* Wed Dec 11 2024 Ge Wang - 2.28-1 +- Upgrade version to 2.28 + * Thu Sep 14 2023 xu_ping <707078654@qq.com> - 2.24-1 - Upgrade version to 2.24 diff --git a/minimap2.yaml b/minimap2.yaml new file mode 100644 index 0000000000000000000000000000000000000000..fc0e5b88545426f8b8a418e1d9fc50764cf95c4f --- /dev/null +++ b/minimap2.yaml @@ -0,0 +1,4 @@ +version_control: github +src_repo: lh3/minimap2 +tag_prefix: "^" +seperator: "."